Missing authorization codes in a transmitted EFT batch

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We're new to Raiser's Edge and transmitted our first batch of recurring EFT transactions. The batch then populated authorization codes for most of them so we thought we were golden. When we got the disbursement report from BBMS we found it included some of the charges that did not have authorization codes. From what I've read, when we commit this batch these transactions without authorization codes will not post to the constituents' records. Do we now have to enter them manually or does anyone know of a way to force them to post?

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